Leptospira: Difference between revisions

From IDWiki
Leptospira
(Imported from text file)
 
mNo edit summary
 
(26 intermediate revisions by the same user not shown)
Line 1: Line 1:
==Background==
= Leptospirosis =
===Microbiology===


*Thin, flagellated [[Shape::spirochete]]
* Infection caused by ''Leptospira'' spp. spirochetes
*Best viewed with darkfield microscopy
*Species and serovars are divided into three broad categories within the genus ''Leptospira''
**Pathogens: ''L. interrogans'' (multiple serovars, most common), ''L. noguchii'', ''L. borgpetersenii'', ''L. santarosai'', ''L. kirschneri'', ''L. weilii'', ''L. alexanderi'', ''L. alstonii'', ''L. meyeri'', ''L. wolffi'', and ''L. kmetyi''
**Non-pathogenic saprophytes: ''L. biflexa'', ''L. wolbachii'', ''L. vanthielii'', ''L. terpstrae'', ''L. yanagawae'', and ''L. idonii''
**Species of indeterminate pathogenicity: ''L. inadai'', ''L. fainei'', ''L. broomii'', and ''L. licerasiae''
*Within each species, there may be multiple serovars that are defined based on lipopolysaccharide (LPS) O-antigens
**A single species may have pathogenic and non-pathogenic serovars


== Microbiology ==
===Epidemiology===


*Endemic worldwide
* Thin, flagellated spirochetes
**More common during rainy seasons in tropical regions and late summer to fall in temperate regions
* Best viewed with darkfield microscopy
**More common after flooding, typhoons, or hurricanes
* Species and serovars are divided into three broad categories within the genus ''Leptospira''
**In US, more common in Hawaii
** Pathogens: ''L. interrogans'' (multiple serovars, most common), ''L. noguchii'', ''L. borgpetersenii'', ''L. santarosai'', ''L. kirschneri'', ''L. weilii'', ''L. alexanderi'', ''L. alstonii'', ''L. meyeri'', ''L. wolffi'', and ''L. kmetyi''
*Major reservoir is as a chronic kidney infection in animals, especially rodents
** Non-pathogenic saprophytes: ''L. biflexa'', ''L. wolbachii'', ''L. vanthielii'', ''L. terpstrae'', ''L. yanagawae'', and ''L. idonii''
**Also other small mammals, but livestock and companion animals
** Species of indeterminate pathogenicity: ''L. inadai'', ''L. fainei'', ''L. broomii'', and ''L. licerasiae''
**Among livestock, may cause spontaneous abortions
* Within each species, there may be multiple serovars that are defined based on lipopolysaccharide (LPS) O-antigens
*Most common risk factor is exposure to water or soil contaminated with animal urine
** A single species may have pathogenic and non-pathogenic serovars
**Includes occupational exposures and direct contact
**High-risk occupations include farmers, slaughterhouse workers, pet traders, veterinarians, rodent catchers and sewer workers
*Leptospires can survive in water or soil for months, depending on the conditions


===Pathophysiology===
== Differential Diagnosis ==


*Bacteria enter through cuts and abrasions, mucous membranes, conjunctivae, and inhalation
* Other infections, including influenza, hepatitis, dengue, Hantavirus infections or other viral haemorrhagic fevers, yellow fever, malaria, brucellosis, borreliosis, typhoid fever or other enteric diseases, and pneumonia.
*After entering, it undergoes widespread hematogenous dissemination
** Think about measles, too, in febrile patients with conjunctivitis (can occur atypically without rash)
**Essentially causes a vasculitis
*Human [[Toll-like receptors|TLR]] 4 cannot bind leptospiral LPS
*Leptospirosis can non-specifically bind and activate T cells in some people
*Virulence factors
**Sphingomyelinase and hemolysin
**Also spirochete motility
**Also hooked ends


==Clinical Manifestations==
== Epidemiology ==


*Spectrum of severity, from asymptomatic seroconversion (most common) to nonspecific febrile illness to severe, life-threating multiorgan failure
* Endemic worldwide
**Asymptomatic disease is likely frequent, given high seroprevalence in some populations
** More common during rainy seasons in tropical regions and late summer to fall in temperate regions
*Incubation period [[Usual incubation period::10 days]] (range [[Incubation period range::5 to 14 days]])
** In US, more common in Hawaii
*'''Acute febrile phase'''
* Major reservoir is as a chronic kidney infection in animals, especially rodents
**Acute phase lasts 5 to 7 days
** Among livestock, may cause spontaneous abortions
**Starts with high [[fever]], [[headache]], chills, rigors, and [[myalgias]]
* Most common risk factor is exposure to water or soil contaminated with rodent urine
**Conjunctival injection is an identifying feature
** Includes occupational exposures and direct contact
**Muscle tenderness, especially in the calf and lumbar areas, is also characteristic
** High-risk occupations include farmers, slaughterhouse workers, pet traders, veterinarians, rodent catchers and sewer workers
**Occasionally have a pretibial papular eruption
* Leptospires can survive in water or soil for months, depending on the conditions
**Can also have [[lymphadenopathy]], [[splenomegaly]], and [[hepatomegaly]]
**Mild leukocytosis and neutrophilia, with thrombocytopenia and occasionally anemia
**Spirochetes detectable in blood and CSF, possibly urine
*'''Immune phase'''
**Lasts 4 to 30 days
**Corresponds with the appearance of IgM antibodies
**Spirochete is cleared from blood and CSF but detectable in other organs, including urine
**May develop [[Causes::jaundice]], [[Causes::acute renal failure]], [[Causes::arrhythmias]], pulmonary symptoms, [[Causes::aseptic meningitis]], [[Causes::non-purulent conjunctival injection]], [[Causes::photophobia]], eye pain, muscle tenderness, [[Causes::adenopathy]], and [[Causes::hepaosplenomegaly|Causes::hepatosplenomegaly]]
*'''Weil disease''' (liver and renal failure) may develop during or directly following the acute phase
**Liver injury is predominantly [[jaundice]] with elevated bilirubin and only mild liver enzyme rise
**[[Acute kidney injury|Acute renal failure]]
***''Nonoliguric'' hypokalemia with impaired sodium reabsorption and increased distal sodium delivery
***Selective loss of ENaC channels in proximal ubule
***Biopsy shows [[Acute interstitial nephritis|AIN]]
*'''Severe pulmonary hemorrhage syndrome''' (SPHS)
**May have frank [[hemoptysis]], but not always
**Can show up as CXR lower lobe "snowflake-like" densities
*[[Arrhythmia|Arrhythmias]], including [[atrial fibrillation]] and [[ventricular tachycardia]]
*Circulatory shock
**Rarely, [[acute heart failure]] from myocarditis
*Severe disease has high mortality from 5 to 40%


==Differential Diagnosis==
== Pathophysiology ==


*Early in disease, it is essentially a non-specific febrile syndrome
* Bacteria enter through cuts and abrasions, mucous membranes, conjunctivae, and inhalation
*'''Viral'''
* After entering, it disseminates hematogenously
**[[Influenza]]
* Human TLR4 cannot bind leptospiral LPS
**Acute [[HIV]]
* Virulence factors
**[[Infectious mononucleosis]] ([[EBV]]/[[CMV]])
** Sphingomyelinase and hemolysin
**Flaviviruses: [[dengue virus]], [[yellow fever virus]], [[West Nile virus]]
** Also spirochete motility
**Alphaviruses: [[Chikungunya virus]]
** Also hooked ends
**Bunyaviruses: [[Hantavirus]], [[Lassa fever virus]]
**Other [[viral hemorrhagic fever virus]]
**[[Viral hepatitis]]
**[[Measles virus]], with cough and conjunctivitis
*'''Bacterial'''
**[[Rickettsioses]], including [[Rocky Mountain spotted fever]]
**[[Borreliosis]]
**[[Brucella]]
**[[Enteric fever]]
*'''Parasitic'''
**[[Malaria]]


== Presentation ==
==Diagnosis==


*In general, use PCR if early in disease (<7 days) and ELISA IgM followed by confirmatory MAT if further in disease (≥7 days)
* Spectrum of severity, from asymptomatic seroconversion (most common) to nonspecific febrile illnes to severe, lifethreating multiorgan failure
* Incubaton period 10 days (range 5 to 14)
* Acute febrile phase
** Acute phase lasts 5 to 7 days
** Starts with high fevers, headaches, chills, rigors, and myalgias
** Conjunctival injection is an identifying feature
** Muscle tenderness, especially in the calf and lumbar areas, is also characteristic
** Can also have lymphadenopathy, splenomegaly, and hepatomegaly
** Spirochetes in blood and CSF, possibly urine
* Immune phase
** Lasts 4 to 30 days
** IgM antibodies appear
** Spirochete is cleared from blood and CSF but detectable in other organs, including urine
** May develop jaundice, renal failure, arrhythmias, pulmonary symptoms, aseptic meningitis, conjunctival injection, photophobia, eye pain, muscle tenderness, adenopathy, and hepaosplenomegaly
* '''Weil disease''' may develop during or directly following the acute phase
** Liver injury
** Renal failure
*** ''Nonoliguric'' hypokalemia with impaired sodium reabsorption and increased distal sodium deliery
*** Selective loss of ENaC channels in proximal ubule
*** Biopsy shows AIN
** Severe pulmonary hemorrhage syndrome (SPHS)
*** May have frank hemoptysis, but not always
*** Can show up as CXR lower lobe "snowflake-like" densities
** Arrhythmias, including atrial fibrillation and ventricular tachycardia
** Circulatory shock
** Rarely, congestive heart failure from myocarditis
** High mortality from 5 to 40%


{| class="wikitable"
== Diagnosis ==
!Method!!Sens!!Spec
|-
|Culture||5-50%||100%
|-
|Darkfield microscopy||40%||60%
|-
|Microscopic agglutination test (MAT)||90%||>90%
|-
|ELISA IgM||>90%||88-95%
|-
|Latex agglutination||92%||95%
|-
|Lateral flow assay||81%||96%
|-
|PCR||100%||93%
|}


=== Microscopy ===
===Microscopy===


* Leptospires can be seen directly under darkfield microscopy
*Leptospires can be seen directly under darkfield microscopy
* Low sensitivity and specificity of blood and urine samples, even if spirochetes are seen (as spirochetes can also be normal flora)
*Low sensitivity and specificity of blood and urine samples, even if spirochetes are seen (as spirochetes can also be normal flora)


=== Culture ===
===Culture===


* Can get positive cultures from blood and CSF, ideally when collected while febrile and before antibiotics
*Can get positive cultures from blood and CSF, ideally when collected while febrile and before antibiotics
* Can innoculate one to blood drops directly into culture at bedside
*Can inoculate one to blood drops directly into culture at bedside
* Urine can be cultured after the first week of illness, but need to be processed quickly
*Urine can be cultured after the first week of illness, but need to be processed quickly
* Use Fletcher's medium (commercial version)
*Use Fletcher's medium (commercial version)
* Not very sensitive, and cultures can take weeks
*Not very sensitive, and cultures can take weeks


=== PCR ===
===Serology===


*Detects IgM antibodies, which appear around day 5 to 7 and likely last for years to decades[[CiteRef::grassmann2022es]]
* Loop-mediated isothermal amplification (LAMP) assays and other PCR assays exist
*IgM ELISA, needs confirmation by MAT (Sn 90%, Sp 90%)
* Unclear sensitivity and specificity, but has the potential to diagnose disease before antibodies develop
**In Canada, this is done at the NML with a turnaround time of up to 30 days
* Usually done from blood, but can try in urine as well
**NML information about [https://cnphi.canada.ca/gts/reference-diagnostic-test/4925?labId=1019 ELISA] and [https://cnphi.canada.ca/gts/reference-diagnostic-test/4927?labId=1019 MAT]
*Microscopic agglutination test (MAT) for antigen detection (Sn 90%, Sp 90%)
**''Leptospira'' antigens are mixed with serum and monitored for agglutination
**Monitor for a four-fold rise in titres from acute-phase to convalescent phase (repeat 4 to 6 weeks), or a single titre of at least 1:800
**May cross-react with [[syphilis]], [[relapsing fever]], [[Lyme disease]], [[viral hepatitis]], HIV, [[Legionella]], and autoimmune diseases
**Cross-reacts between different serogroups
*Latex agglutination test, needs confirmation by MAT (Sn 80%, Sp 95%)
*Lateral flow test, needs confirmation by MAT (Sn 80%, Sp 95%)


=== Serology ===
===PCR===


*Loop-mediated isothermal amplification (LAMP) assays and other PCR assays exist
* Detects IgM antibodies, which appear around day 5
*Unclear sensitivity and specificity, but has the potential to diagnose disease before antibodies develop
* Microscopic agglutination test (MAT) for antigen detection (Sn 90%, Sp 90%)
*Usually done from blood, but can try in urine as well
** ''Leptospira'' antigens are mixed with serum and monitored for agglutination
*In Canada, [https://cnphi.canada.ca/gts/reference-diagnostic-test/4923?labId=1019 available through the NML] with a turnaround time of 21 days
** Monitor for a four-fold rise in titres from acute-phase to convalescent phase (repeat 4 to 6 weeks), or a single titre of at least 1:800
** May cross-react with syphilis, relapsing fever, Lyme disease, viral hepatitis, HIV, legionellosis, and autoimmune diseases
** Cross-reacts between different serogroups
* IgM ELISA, needs confirmation by MAT (Sn 90%, Sp 90%)
* Latex agglutination test, needs confirmation by MAT (Sn 80%, Sp 95%)
* Lateral flow test, needs confirmation by MAT (Sn 80%, Sp 95%)


== Management ==
===Faine's Criteria===


*[[Faine's criteria]] use clinical, epidemiological, and laboratory findings to diagnose leptospirosis
* Treat early in disease course
* Usual treatment is penicillin 1.5 MU IV q6h, if severe, or doxycycline 100 mg po bid, if mild
** May be able to use amoxicillin, ampicillin, or ceftriaxone as alternatives
** May develop a Jarisch-Herxheimer reaction during treatment (only with beta-lactams)
** Duration about 7 days
* Close monitor and intensive supportive therapy required for severe patient
* May need hemodialysis, but usually recovers renal function
* SPHS is managed as ARDS with lung-protective ventilation


== Prevention ==
==Management==


*Treat empirically early in disease course, usually before diagnosis
* Mostly avoidance of high-risk exposures
**Consider empiric [[doxycycline]] if [[rickettsioses]] are on the differential
* Immunization is possible but rarely done, and covers only specific serovars
*Usual treatment is [[Is treated by::penicillin]] G 1.5 MU IV q6h, if severe, or [[Is treated by::doxycycline]] 100 mg po bid, if mild
* Can do chemoprophylaxis of high risk occupations with doxycycline 200 mg po once weekly
**May be able to use [[Is treated by::amoxicillin]], [[Is treated by::ampicillin]], [[Is treated by::ceftriaxone]], or [[Is treated by::azithromycin]] as alternatives
***It is also likely that [[ertapenem]], [[cefepime]], and [[norfloxacin]] are also effective[[CiteRef::zhang2014ef]]
**May develop a [[Jarisch-Herxheimer reaction]] during treatment (only with [[β-lactams]])
**Duration is 5 to 7 days (except 3 days for [[azithromycin]])
*Close monitor and intensive supportive therapy required for severe patient
**In the immunologic phase, mostly focus on supportive care
**May need [[hemodialysis]], but usually recovers renal function
**SPHS is managed as [[Acute respiratory distress syndrome|ARDS]] with lung-protective ventilation


==Prevention==
== Further Reading ==

*Mostly avoidance of high-risk exposures
*Immunization is possible but rarely done, and covers only specific serovars
**Even if immunizing animals, it prevents disease but not asymptomatic carriage
*Can do chemoprophylaxis of high risk occupations with [[doxycycline]] 200 mg PO once weekly

{{DISPLAYTITLE:''Leptospira''}}
[[Category:Spirochetes]]

Latest revision as of 17:04, 27 September 2024

Background

Microbiology

  • Thin, flagellated spirochete
  • Best viewed with darkfield microscopy
  • Species and serovars are divided into three broad categories within the genus Leptospira
    • Pathogens: L. interrogans (multiple serovars, most common), L. noguchii, L. borgpetersenii, L. santarosai, L. kirschneri, L. weilii, L. alexanderi, L. alstonii, L. meyeri, L. wolffi, and L. kmetyi
    • Non-pathogenic saprophytes: L. biflexa, L. wolbachii, L. vanthielii, L. terpstrae, L. yanagawae, and L. idonii
    • Species of indeterminate pathogenicity: L. inadai, L. fainei, L. broomii, and L. licerasiae
  • Within each species, there may be multiple serovars that are defined based on lipopolysaccharide (LPS) O-antigens
    • A single species may have pathogenic and non-pathogenic serovars

Epidemiology

  • Endemic worldwide
    • More common during rainy seasons in tropical regions and late summer to fall in temperate regions
    • More common after flooding, typhoons, or hurricanes
    • In US, more common in Hawaii
  • Major reservoir is as a chronic kidney infection in animals, especially rodents
    • Also other small mammals, but livestock and companion animals
    • Among livestock, may cause spontaneous abortions
  • Most common risk factor is exposure to water or soil contaminated with animal urine
    • Includes occupational exposures and direct contact
    • High-risk occupations include farmers, slaughterhouse workers, pet traders, veterinarians, rodent catchers and sewer workers
  • Leptospires can survive in water or soil for months, depending on the conditions

Pathophysiology

  • Bacteria enter through cuts and abrasions, mucous membranes, conjunctivae, and inhalation
  • After entering, it undergoes widespread hematogenous dissemination
    • Essentially causes a vasculitis
  • Human TLR 4 cannot bind leptospiral LPS
  • Leptospirosis can non-specifically bind and activate T cells in some people
  • Virulence factors
    • Sphingomyelinase and hemolysin
    • Also spirochete motility
    • Also hooked ends

Clinical Manifestations

  • Spectrum of severity, from asymptomatic seroconversion (most common) to nonspecific febrile illness to severe, life-threating multiorgan failure
    • Asymptomatic disease is likely frequent, given high seroprevalence in some populations
  • Incubation period 10 days (range 5 to 14 days)
  • Acute febrile phase
    • Acute phase lasts 5 to 7 days
    • Starts with high fever, headache, chills, rigors, and myalgias
    • Conjunctival injection is an identifying feature
    • Muscle tenderness, especially in the calf and lumbar areas, is also characteristic
    • Occasionally have a pretibial papular eruption
    • Can also have lymphadenopathy, splenomegaly, and hepatomegaly
    • Mild leukocytosis and neutrophilia, with thrombocytopenia and occasionally anemia
    • Spirochetes detectable in blood and CSF, possibly urine
  • Immune phase
  • Weil disease (liver and renal failure) may develop during or directly following the acute phase
    • Liver injury is predominantly jaundice with elevated bilirubin and only mild liver enzyme rise
    • Acute renal failure
      • Nonoliguric hypokalemia with impaired sodium reabsorption and increased distal sodium delivery
      • Selective loss of ENaC channels in proximal ubule
      • Biopsy shows AIN
  • Severe pulmonary hemorrhage syndrome (SPHS)
    • May have frank hemoptysis, but not always
    • Can show up as CXR lower lobe "snowflake-like" densities
  • Arrhythmias, including atrial fibrillation and ventricular tachycardia
  • Circulatory shock
  • Severe disease has high mortality from 5 to 40%

Differential Diagnosis

Diagnosis

  • In general, use PCR if early in disease (<7 days) and ELISA IgM followed by confirmatory MAT if further in disease (≥7 days)
Method Sens Spec
Culture 5-50% 100%
Darkfield microscopy 40% 60%
Microscopic agglutination test (MAT) 90% >90%
ELISA IgM >90% 88-95%
Latex agglutination 92% 95%
Lateral flow assay 81% 96%
PCR 100% 93%

Microscopy

  • Leptospires can be seen directly under darkfield microscopy
  • Low sensitivity and specificity of blood and urine samples, even if spirochetes are seen (as spirochetes can also be normal flora)

Culture

  • Can get positive cultures from blood and CSF, ideally when collected while febrile and before antibiotics
  • Can inoculate one to blood drops directly into culture at bedside
  • Urine can be cultured after the first week of illness, but need to be processed quickly
  • Use Fletcher's medium (commercial version)
  • Not very sensitive, and cultures can take weeks

Serology

  • Detects IgM antibodies, which appear around day 5 to 7 and likely last for years to decades1
  • IgM ELISA, needs confirmation by MAT (Sn 90%, Sp 90%)
    • In Canada, this is done at the NML with a turnaround time of up to 30 days
    • NML information about ELISA and MAT
  • Microscopic agglutination test (MAT) for antigen detection (Sn 90%, Sp 90%)
    • Leptospira antigens are mixed with serum and monitored for agglutination
    • Monitor for a four-fold rise in titres from acute-phase to convalescent phase (repeat 4 to 6 weeks), or a single titre of at least 1:800
    • May cross-react with syphilis, relapsing fever, Lyme disease, viral hepatitis, HIV, Legionella, and autoimmune diseases
    • Cross-reacts between different serogroups
  • Latex agglutination test, needs confirmation by MAT (Sn 80%, Sp 95%)
  • Lateral flow test, needs confirmation by MAT (Sn 80%, Sp 95%)

PCR

  • Loop-mediated isothermal amplification (LAMP) assays and other PCR assays exist
  • Unclear sensitivity and specificity, but has the potential to diagnose disease before antibodies develop
  • Usually done from blood, but can try in urine as well
  • In Canada, available through the NML with a turnaround time of 21 days

Faine's Criteria

  • Faine's criteria use clinical, epidemiological, and laboratory findings to diagnose leptospirosis

Management

Prevention

  • Mostly avoidance of high-risk exposures
  • Immunization is possible but rarely done, and covers only specific serovars
    • Even if immunizing animals, it prevents disease but not asymptomatic carriage
  • Can do chemoprophylaxis of high risk occupations with doxycycline 200 mg PO once weekly

References

  1. ^  Eleanor M. Rees, Colleen L. Lau, Mike Kama, Simon Reid, Rachel Lowe, Adam J. Kucharski. Andre Alex Grassmann. Estimating the duration of antibody positivity and likely time of Leptospira infection using data from a cross-sectional serological study in Fiji. PLOS Neglected Tropical Diseases. 2022;16(6):e0010506. doi:10.1371/journal.pntd.0010506.
  2. ^  Wenlong Zhang, Naisheng Zhang, Wei Wang, Fei Wang, Yue Gong, Haichao Jiang, Zecai Zhang, Xiaofei Liu, Xiaojing Song, Tiancheng Wang, Zhuang Ding, Yongguo Cao. Efficacy of cefepime, ertapenem and norfloxacin against leptospirosis and for the clearance of pathogens in a hamster model. Microbial Pathogenesis. 2014;77:78-83. doi:10.1016/j.micpath.2014.11.006.