Hyaline molds: Difference between revisions

From IDWiki
(β†’β€: moved Fusarium to own page)
No edit summary
Β 
(10 intermediate revisions by the same user not shown)
Line 1: Line 1:
 
* Filamentous fungi that do ''not'' have melanin present in the fungal cells (although the spores may be coloured).
 
* Filamentous fungi that do ''not'' have melanin present in the fungal cells (although the spores may be coloured).
  +
* Common genera include:
βˆ’  
βˆ’
== ''Aspergillus'' species ==
+
** [[Aspergillus]]
  +
** [[Fusarium]]
βˆ’  
  +
** [[Penicillium]]
βˆ’
=== Epidemiology ===
 
  +
**[[Scedosporium]]
βˆ’  
  +
*Other genera include:
βˆ’
* ''[[Aspergillus]]'' is a ubiquitous fungus present worldwide, most commonly found in soil, air, water, and decaying vegetation. Risk factors for invasive disease include prolonged neutropenia (such as after induction chemotherapy), hematopoietic stem cell transplantation, graft-vs-host disease (especially with intensified therapy), solid-organ transplant (especially lung), anti-TNF-alpha immunosuppression, and CMV reactivation. Outbreaks have happened after construction.
 
  +
**[[Acremonium]]
βˆ’  
  +
**[[Arthrinium]]
βˆ’
=== Pathogenesis ===
 
  +
**[[Beauveria]]
βˆ’  
  +
**[[Chrysosporium]]
βˆ’
* Conidia are inhaled into the lungs and alveoli, where, if not cleared, the conidia can germinate and start to invade. The normal host defense involves ciliary clearance of the conidia, destruction of the conidia by pulmonary macrophages, or destruction of the hyphal form by PMNs.
 
  +
**[[Geotrichum]]
βˆ’
** ''A. fumigatus'' has smaller conidia and may be more likely to reach the alveoli, which may explain the increased pathogenicity.
 
  +
**[[Gliocladium]]
βˆ’
* Opsonization and complement may also be important.
 
  +
**[[Malbranchea]]
βˆ’
* T-cell response is also important, with a Th-1 response being more favourable than Th-2.
 
  +
**[[Paecilomyces]]
βˆ’
* Hydrocortisone appears to be a growth factor.
 
  +
**[[Pestalotiopsis]]
βˆ’  
  +
**[[Purpureocillium]]
βˆ’
=== Spectrum of Disease ===
 
  +
**[[Rasamsonia]]
βˆ’  
  +
**[[Sarocladium]]
βˆ’
* Colonization and superficial infections
 
  +
**[[Scedosporium]]
βˆ’
** Pulmonary aspergilloma
 
  +
**[[Scopulariopsis]]
βˆ’
** Otomycosis
 
  +
**[[Sepedonium]]
βˆ’
** Onychomycosis
 
  +
**[[Trichoderma]]
βˆ’
** Keratitis
 
  +
**[[Trichothecium roseum]]
βˆ’
* Allergic syndromes
 
  +
**[[Verticillium]]
βˆ’
** Allergic bronchopulmonary aspergillosis (ABPA)
 
βˆ’
** Allergic fungal rhinosinusitis
 
βˆ’
* Invasive aspergillosis, also a spectrum
 
βˆ’
** Chronic cavitary pulmonary aspergillosis (CCPA)
 
βˆ’
** Chronic necrotizing pulmonary aspergillosis
 
βˆ’
** Invasive pulmonary aspergillosis
 
βˆ’
* Other rare syndromes
 
βˆ’
** Ulcerative tracheobronchitis
 
βˆ’
** Invasive fungal rhinosinusitis
 
βˆ’
** Hematogenous dissemination to any organ
 
βˆ’
*** Cerebral aspergillosis
 
βˆ’
*** Osteomyelitis
 
βˆ’
*** SSTI
 
βˆ’  
βˆ’
=== Non-culture diagnostic methods ===
 
βˆ’  
βˆ’
* '''Serology''' for aspergillus antibodies exists, but is unhelpful, since it is a ubiquitous mold
 
βˆ’
* '''Galactomannan (GM):''' in serum or bronchoalveolar lavage (maybe CSF)
 
βˆ’
** Release by the fungal cell wall during growth
 
βˆ’
** Cutoff of 0.5 has 80% Sn and Sp (higher Sp and lower Sn at higher threshold)
 
βˆ’
*** Up to 90% in HSCT patients (serum)
 
βˆ’
*** Lower sensitivity in SOT
 
βˆ’
*** BAL fluid has higher sensitivity
 
βˆ’
** Can do it in CSF as well
 
βˆ’
** False-positives with piptazo and other beta-lactams (but may not still be the case)
 
βˆ’
** No longer useful in surveillance now that we use mold-active antifungal prophylaxis (per IDSA)
 
βˆ’
* '''1,3-beta-D-glucan''' (BDG): can detect ''Candida'' and ''Pneumocystis'' as well, so less specific. May be useful in combination with GM.
 
βˆ’
** Utility in invasive fungal infections: from [https://doi.org/10.1371/journal.pone.0131602 a systematic review in 2015], it is about 80% sensitive and 85% specific for IFI. Identified ''Candida'' and ''Aspergillus''. In [https://doi.org/10.1016/j.jinf.2014.04.008 a retrospective review from 2014], it had similar specific and inferior sensitivity compared to GM.
 
βˆ’
** Combination serologies: GM (BAL) Sn 43-56% and Sp 97%; BDG (blood) Sn 56-65% and Sp 97%; combination of ''either'' test positive Sn 78-92%% and Sp 93%, while PCR did not have any additional benefit ([https://doi.org/10.1016/j.cmi.2016.06.021 source]).
 
βˆ’
* '''Fungal PCR''' possible, but not routinely done; may not be helpful since the fungus is ubiquitous and wouldn’t differentiate invasive disease vs. colonization.
 
βˆ’
* '''Microarray DNA''':
 
βˆ’
* Microbiologic diagnostics are often combined with imaging to diagnose probable invasive fungal infection.
 
βˆ’  
βˆ’
=== Identification of ''Aspergillus'' spp. ===
 
βˆ’  
βˆ’
[[File:media/image12.png]]
 
βˆ’  
βˆ’
* Identification is done based on macroscopic appearance, microscopic features (especially of the fruiting body), and sometimes with special tests.
 
βˆ’
* Complexes cannot be differentiated phenotypically, but rather need molecular methods
 
βˆ’
** May have cryptic species that are more resistant.
 
βˆ’
** Fumigatus: fumigatus, lentulus, udagawae
 
βˆ’
** Ustus: '''''A. calidoustus''''' (inherent resistance to ampho B)
 
βˆ’
** Niger: tubingensis and niger
 
βˆ’
** Versicolor: versicolor and sydowii
 
βˆ’  
βˆ’
{| class="wikitable"
 
βˆ’
! '''Species'''
 
βˆ’
! '''Colonies'''
 
βˆ’
! '''Head'''
 
βˆ’
! '''Conidiophore'''
 
βˆ’
! '''Phialides'''
 
βˆ’
! '''Other'''
 
βˆ’
|-
 
βˆ’
| ''A. flavus''
 
βˆ’
| Yellow green, yellow, brownish
 
βˆ’
| [[File:media/image11.png]]
 
βˆ’
| Rough colourless
 
βˆ’
| Uniseriate and biseriate
 
βˆ’
| Sclerotia sometimes present
 
βˆ’
|-
 
βˆ’
| ''A. fumigatus'' complex
 
βˆ’
| Grey-green, blue green, yellowish
 
βˆ’
| [[File:media/image5.png]]
 
βˆ’
| Smooth, colourless or greenish
 
βˆ’
| Uniseriate
 
βˆ’
| Good growth at 48ΒΊC
 
βˆ’
|-
 
βˆ’
| ''A. glaucus''
 
βˆ’
| Green and yellow, yellowish, brown
 
βˆ’
| [[File:media/image2.png]]
 
βˆ’
| Smooth, colourless
 
βˆ’
| Uniseriate
 
βˆ’
| Yellow to orange cleistothecia present
 
βˆ’
|-
 
βˆ’
| ''A. nidulans''
 
βˆ’
| Green buff, purplish red, olive
 
βˆ’
| [[File:media/image8.png]]
 
βˆ’
| Smooth, brown
 
βˆ’
| Biseriate
 
βˆ’
| Round hΓΌlle cells and cleistothecia with purple ascospores usually present
 
βˆ’
|-
 
βˆ’
| ''A. niger''
 
βˆ’
| Black, white, yellowish
 
βˆ’
| [[File:media/image1.png]]
 
βˆ’
| Smooth, colourless or brown
 
βˆ’
| Biseriate
 
βˆ’
|
 
βˆ’
|-
 
βˆ’
| ''A. terreus''
 
βˆ’
| Brown cinnamon, yellowish brown
 
βˆ’
| [[File:media/image4.png]]
 
βˆ’
| Smooth, colourless
 
βˆ’
| Biseriate
 
βˆ’
| Round, solitary aleurioconidia produced directly on hyphae
 
βˆ’
|-
 
βˆ’
| ''A. ustus''
 
βˆ’
| Light brown, grayish brown, yellowish brown
 
βˆ’
|
 
βˆ’
| Smooth, brown
 
βˆ’
| Biseriate
 
βˆ’
| Long, brown-walled conidiophores, small vesicles, rough-walled conidia
 
βˆ’
|-
 
βˆ’
| ''A. versicolor''
 
βˆ’
| White, buff, yellow, pink, pale green, white, yellow, purplish red
 
βˆ’
|
 
βˆ’
| Smooth, colourless
 
βˆ’
| Biseriate
 
βˆ’
| Round hΓΌlle cells sometimes present
 
βˆ’
|}
 
βˆ’  
βˆ’
=== Antifungal resistance ===
 
βˆ’  
βˆ’
* '''Antifungal mechanisms'''
 
βˆ’
** '''Polyenes''' (amphotericin): binds ergosterol to create pores within the cell membrane.
 
βˆ’
** '''Triazoles''' (except fluconazole): inhibit sterol synthesis of ergosterol by disrupting 14-alpha demethylase. The mechanisms of resistance are myriad: modification of target enzymes, an increased expression of drug efflux mechanisms, an overexpression of target enzymes, an incorporation of exogenous cholesterol, an overexpression of HSP90 and of a sterole-regulatory element binding protein.
 
βˆ’
** '''Echinocandins''' (the fungins): disrupt synthesis of beta-glucan in the cell wall by inhibiting 1,3-beta glucan synthase.
 
βˆ’
* '''Resistance patterns'''
 
βˆ’
** All species are resistant to fluconazole. Historically, amphotericin has been the most reliable anti-''Aspergillus'' antifungal; now, voriconazole is the standard.
 
βˆ’
** Resistance to amphotericin is seen in ''A. terreus'', ''A. flavus'', and other less common species.
 
βˆ’
** ''A. niger'' has variable susceptibility to azoles. There is increasing ''A. fumigatus'' resistance to azoles, with reports being most common from Europe. ''A. calidoustus'' (within ''A. ustus'' complex) is a growing cause, with late presentation, intrinsic antifungal resistance, and high mortality.
 
βˆ’  
βˆ’
{| class="wikitable"
 
βˆ’
! Organism
 
βˆ’
! AmB
 
βˆ’
! Fluc
 
βˆ’
! Itra
 
βˆ’
! Vori
 
βˆ’
! Posa
 
βˆ’
! Anidula
 
βˆ’
! Caspo
 
βˆ’
! Mica
 
βˆ’
! Flucyt
 
βˆ’
|-
 
βˆ’
| ''Aspergillus'' spp.
 
βˆ’
| +
 
βˆ’
| –
 
βˆ’
| +
 
βˆ’
| +
 
βˆ’
| +
 
βˆ’
| +
 
βˆ’
| +
 
βˆ’
| +
 
βˆ’
| –
 
βˆ’
|-
 
βˆ’
| * A. flavus*
 
βˆ’
| Β±
 
βˆ’
| –
 
βˆ’
| +
 
βˆ’
| +
 
βˆ’
| +
 
βˆ’
| +
 
βˆ’
| +
 
βˆ’
| +
 
βˆ’
| –
 
βˆ’
|-
 
βˆ’
| * A. fumigatus*
 
βˆ’
| +
 
βˆ’
| –
 
βˆ’
| +
 
βˆ’
| +
 
βˆ’
| +
 
βˆ’
| +
 
βˆ’
| +
 
βˆ’
| +
 
βˆ’
| –
 
βˆ’
|-
 
βˆ’
| * A. terreus*
 
βˆ’
| –
 
βˆ’
| –
 
βˆ’
| +
 
βˆ’
| +
 
βˆ’
| +
 
βˆ’
| +
 
βˆ’
| +
 
βˆ’
| +
 
βˆ’
| –
 
βˆ’
|-
 
βˆ’
| * A. niger*
 
βˆ’
| +
 
βˆ’
| –
 
βˆ’
| Β±
 
βˆ’
| +
 
βˆ’
| +
 
βˆ’
| +
 
βˆ’
| +
 
βˆ’
| +
 
βˆ’
| –
 
βˆ’
|}
 
βˆ’  
βˆ’
[[File:media/image6.png]]
 
βˆ’  
βˆ’
=== Susceptibility testing ===
 
βˆ’  
βˆ’
* '''Broth microdilution''' is the main method for determining ''Aspergillus'' susceptibility recommended by CLSI and EUCAST. Microdilution results are affected by a number of factors (shape of the microdilution well, inoculum concentration, temperature and length of incubation time), so testing must be rigorously standardized.
 
βˆ’  
βˆ’
== Other hyaline molds ==
 
βˆ’  
βˆ’
=== ''Scedosporium'' spp. ===
 
βˆ’  
βˆ’
* Epidemiology
 
βˆ’
** Found in rural soils, polluted waters, compost, cattle manure, and bird poop, as well as colonizing the respiratory tract.
 
βˆ’
** Present worldwide.
 
βˆ’
** Affects primarily the immunocompromised, though can cause localized infections in immunocompetent as well.
 
βˆ’
* Spectrum of disease
 
βˆ’
** Colonization of airways, especially in bronchiectasis
 
βˆ’
** ''Pseudallescheria boydii'' (''Scedosporium apioΒ­spermum'') can cause mycetoma, and also pseudallescheriasis/scedosporiosis of lung, bone, joint, CNS. Rare sites of involvement include sinusitis, keratitis, endophthalmitis, skin and soft tissue infections, prostatitis, and endocarditis.
 
βˆ’
** ''Scedosporium prolificans'' usually causes localized infections in immunocompetent patients (bone and joint, eye, wounds, onychomycosis). In immunocompromised patients (e.g. neutropenia from chemotherapy), can disseminate and involve skin, lung, muscle, endophthalmitis
 
βˆ’
* Diagnosis
 
βˆ’
** With culture, though may represent colonization if recovered from a respiratory specimen.
 
βˆ’
** Colony grows rapidly, with wooly to cottony texture, a white surface that browns as it ages, and a pale reverse with brownish black zones.
 
βˆ’
** Septate, hyaline hyphae with annellide conidiophores that are simple or branched. Onidia are unicellular, obovoid, and pale brown. Sometimes has a ''Graphium'' state where conidiophores are bound together. Brown cleistothecia may be present after 2-3 weeks of incubation (looks like a pacman vomiting out conidia).
 
βˆ’
* Treatment
 
βˆ’
** ''S. apiopsermum'' is treated with voriconazole or amphotericin B. However, ''S. prolificans'' is extremely resistant to antifungals including amphotericin
 
   
 
[[Category:Microbiology]]
 
[[Category:Microbiology]]
βˆ’
[[Category:Fungi]]
+
[[Category:Filamentous fungi]]

Latest revision as of 17:23, 17 April 2022